106 Plant species with known P450s by taxonomic group
Last modified December 31, 2003
Seed Plants
Gymnosperms
- Cycadales
- Ginkgoales
- Coniferales
Cryptomeria japonica (Japanese cedar) unnamed fragment
Pinus taeda (loblolly pine) 51, 73A20, 73A23, CYP92 ESTs, 98A19,
ESTs for 71 clan, 72 clan, 74 clan, 85 clan, 86 clan, 97 clan and 710 clan
Pinus radiata (Monterey pine) 78A4
Pinus pinaster (cluster pine) 724B5
Taxus cuspidata (Japanese yew) 725A1, 725A2, 725A3
- Gnetophytes
- Ephedrales
- Gnetales
- Welwitschiales
Flowering Plants
- Amborella (the basal angiosperm species)
Amborella trichopoda 90B5
- Nymphaeaceae (water lillies)
- Illiciales clade (Austrobaileyaeceae, Illiciaceae, Schisandraceae) includes star anise
- Magnoliales
- Winterales
- Piperales
- Laurales
Persea americana (avocado) 71A1, 715B1
Liliopsida (Monocotyledons)
- Acorales (sister group to other monocots)
- Alismatales
Triglochin maritima 79E1, 79E2
- Asparagales
Asparagus officianalis 71G1, 71J1
Hemerocallis hybrid cultivar (daylily) 81J1
Phalaenopsis sp. hybrid SM9108 (moth orchid) 78A2
- Arecales
- Commelinales
Musa acuminata (banana) 71N1
- Poales (includes Poaceae, grasses)
Avena (oats) 96B1
Hordeum vulgare (barley) fragment 71C-like, 71L1, 71M1, 72A39, 73A34,
74A1, 74A3, 79A8, 79A12, 727A2
Lolium rigidum(ryegrass) 71R4
Oryza sativa (rice) 455 sequences (see rice button on main page)
Saccharum officinarum(sugar cane) fragment 90A-like, 724B4
Sorghum bicolor 51, 71E1, 79A1, 98A1, 99A1
Triticum aestivum (wheat) 51, 71C6, 71C7, 71C8, 71C9, 71C10, 71C11,
71E2, 71F1, 71M3, 72A6, 73A17, 76H1, 76H2, 76H3, 79A5, 79A6, 81L1,
86A5, 86A6, 98A10, 98A11, 98A12, 709C1, 709C2, 709C3, 723A1, 727A3
Zea mays (maize) 51, 71C1, 71C2, 71C3, 71C4, 71C5, 72A5, 72A16, 72A26
73A6, 73A7, 73A8, 78A1, 81A1, 81A2, 81A3, 81A4, 88A1, 90 ESTs, 92A1, 92A4
97 EST, 98A7 ESTs, 707 EST
- Zingiberales
- Discreales
- Liliales
- Pandanales
Eudicotyledons
- Ceratophyllales (sister group to other eudicots)
Lower Eudicots
- Nelumbo
- Platanus
- Sabia
- Lambertia
- Trochodendron
- Tetracentron
- Pachysandra
- Ranunculales
Berberis stolonifera 80A1
Eschscholzia californica (California poppy) 80B1, 82B1, 719A2, 719A3
Coptis japonica (Japanese goldthread) 80B2, 719A1
Papaver somniferum (opium poppy) 80B3
Core Eudicots (six well supported subclades)
- (1) Berberidopsidaceae/Aextoxicaceae
- (2) Myrothamnaceae/Gunneraceae
- (3) Saxifragales (Vitaceae, eurosids)
Liquidambar styraciflua (sweetgum) 84A3
Vitis vinifera (grape) 76F2
- eurosids I
- Celestrales
- Cucurbitales
Cucumis sativus (cucumber) 74B6P, 74C1
Cucumis melo (cantaloupe mellon) 74C2
Cucurbita maxima (pumpkin) 88A2, 701A1, 701A2
- Fabales
Cicer arietinum (chickpea) 73A19, 76D1, 76F1, 81D9, 81E2, 81E3, 81E4,
81E5, 91A5, 93C3, 97A1
Glycine max (soybean) 71A9, 71A10, 71D8, 71D9, 71D10, 73A11, 77A3,
78A3,82A2, 82A3, 82A4, 82C1, 83D1, 84A ESTs, 93A1, 93A2, 93A3,
93C1, 93C4, 93C5, 93E1, 97B2, 97C, 98A2
Glycyrrhiza echinata (licorice) 73A14, 81E1, 84A PCR fragment,
91A4, 93A PCR fragment, 93B1, 93C2
Lens cunicularis (lentil) 93C12, 93C13
Lotus japonicus 71D11, 79D3, 79D4, 81E6, 83E2, 83E3, 83E4, 83E5,
83E6, 83E7, 93C17, 706A9P, 736A2
Lupinus albus 93C16
Lupinus luteus (yellow lupine) 74AP1, 74AP2
Medicago sativa (alfalfa) 73A3, 74B4, 76B3, 76B4, 76E1, 82D1, 83D2
83E1, 93C7, 93C8
Medicago truncatula 81E7, 81E8, 81E9, 87 fragment
Phaseolus aureus (mung bean) 73A2
Phaseolus vulgaris (french bean, kidney bean) 73A15, 98A5
Pisum sativum (pea) 73A9, 82A1, 88A6, 88A7, 92A6, 93C14, 93C18,
94 fragment, 97B1, 701A10
Trifolium pratense 93C9
Trifolium repens 93C10
Vicia sativa 89A1, 94A1, 94A2, 94A3
Vicia villosa 93C15
Vinga radiata 90A2, 93C6
- Fagales
- Malpighiales
Linum usitatissimum (flax) 74A
Manihot esculenta (cassava) 79D1, 79D2
Populus tremuloides (quaking aspen) 73A13
Populus kitakamiensis (hybrid aspen) 73A16
- Oxalidales
- Rosales
Prunus dulcis chloroplast (almond) 71D17
Pyrus communis (pear) 736A1
- Zygophyllales
- eurosids II
- Brassicales
Arabidopsis thaliana (thale cress) 272 sequences see Arabidopsis button
Brassica campestris (field mustard) 86A3
Brassica naupus (rape) 79B5
Matthiola incana (common stock) 75B7, 706A8
Sinapis alba (white mustard) 79B1
Thlaspi arvense 71B1
- Malvales
Gossypium hirsutum (cotton) 73A25, 73A26, 97C fragment
Gossypium arboreum 706B1, 706B2
- Sapindales
Citrus sinensis 73A29, 73A36
Citrus paradisi 73A37
Ruta graveolens (common rue) 73A32
- additional eurosids
- Crossomatales
- Gerianales
Pelargonium x Hortorum (house geranium) 75B8
- Myrtales
Psidium guajava (guava) 74B5
- (4) Santalales
- (5) Caryophyllales/Dilleniaceae
Mesembryanthemum crystallinum (ice plant) 73A22
Beta vulgaris 93C11
- (6) asterids
euasterids I
- Garryales
- Gentianales
Catharanthus roseus (Madagascar periwinkle) 71A7, 71D1, 71D2, 71D12,
72A1, 73A4, 75A8, 76A7, 76B6, 96C1,
Eustoma grandiflorum (lisianthus) 75A5
Eustoma russellianum 75A7
Gentiana triflora 75A4, 75B9
- Lamiales
Antirrhinum majus (snapdragon) 93B3
Coleus blumei 98A14
Mentha X piperita (peppermint) 71A8, 71D13, 71D15
Mentha spicata (spearmint) 71D18
Nepeta racemosa (catmint, source of catnip) 71A5, 71A6
Omicum basilicum (basil) 98A13
Perilla frutescens (beefsteak mint) 75B4, 93B6
Sesamum indicum (sesame) 98A20
Torenia hybrida (torenia) 93B4, 75A10, 75B10
- Solanales
Capsicum annuum (bell pepper) 71D19, 74B1, 701A4
Capsicum chinense (habanero chile) 73A21
Lithospermum erythrorhizon 73A30, 73A31, 98A6
Lycianthes rantonnei (blue potato bush) 75A9
Lycopersicon esculentum or Solanum lycopersicum (tomato) 71AH1, 72A30,
73A18, 73A24, 73A27, 73A28, 74A1, 74A2, 74B3, 74C3, 74C4, 74D1,
76A6, 81B2, 81C1, 81C2, 84A2, 85, 88B1, 90A5, 90C2, 707A7, 707A8,
710A11, 724B2, 734A7, 734A8
Nicotiana attenuata 74A1
Nicotiana plumbaginifolia 72A2
Nicotiana tabacum (tobacco) 71D5, 71D6, 71D16, 71D20, 71D21, 82E1,
92A2, 92A3, 94A4, 92A5, 94A5, 94A6, 94A7, 94A8
Petunia hybrida (petunia) 71D14, 75A1, 75A3, 75B2, 76A3, 76A4, 76A5,
76B2, 76B5, 76J1, 92B1, 703A1
Solanum chacoense (Chaco potato) 71D6, 71D7,
Solanum melongena cv. Sinsadoharanasu (eggplant) 71A2, 71A3, 71A4,
75A2, 76A1, 76A2, 77A1, 77A2
Solanum tuberosum cv. Datura (potato) 71D4, 72A29, 74D2
euasterids II
- Apiales
Ammi majus (Bishop's weed) 71AJ1, 73A41, 76B8, 82H1, 98A21
Pastinaca sativa (wild parsnip) 76B7
Petroselinum crispum (parsley) 73A10, 83C1
- Aquifoliales
- Asterales
Callistephus chinensis 75B5, 75B6, 93B5
Campanula medium 75A6
Gerbera hybrid (Barberton Daisy) 93B2
Helianthus tuberosus (Jerusalem artichoke) 73A1, 76B1, 81B1
Helianthus annuus (sunflower) 87A1
Parthenium argentatum (guayule, a desert shrub) 74A1
Stevia rebaudiana 701A5
Zinnia elegans 73A12
- Dipsacales
References
1. Soltis, D.E., Soltis, P.S. and Chase, M.W. (1999) Angiosperm phylogeny inferred
from a combined data set of 18S rDNA, rbcL and ATPB sequences. Abstract of The
XVI International Botanical Congress meeting in St. Louis Aug. 1-7, 1999 abstract
2. Treezilla project: go to Treezilla description includes ASCII version of 500 rbcL tree.
go to Treezilla abstract
Ken Rice ken_rice@sbphrd.com
Michael Donoghue mdonoghue@oeb.harvard.edu
Dick Olmstead olmstead@spot.colorado.edu
3. Taxonomy Browser at NCBI jump to browser