106 Plant species with known P450s by taxonomic group

Last modified December 31, 2003

Seed Plants

Gymnosperms

Cycadales
Ginkgoales
Coniferales
  Cryptomeria japonica (Japanese cedar) unnamed fragment
  Pinus taeda (loblolly pine) 51, 73A20, 73A23, CYP92 ESTs, 98A19, 
ESTs for 71 clan, 72 clan, 74 clan, 85 clan, 86 clan, 97 clan and 710 clan
  Pinus radiata (Monterey pine) 78A4
  Pinus pinaster (cluster pine) 724B5
  Taxus cuspidata (Japanese yew) 725A1, 725A2, 725A3
Gnetophytes

Ephedrales
Gnetales
Welwitschiales


Flowering Plants

Amborella  (the basal angiosperm species)
  Amborella trichopoda 90B5
Nymphaeaceae (water lillies)
Illiciales clade (Austrobaileyaeceae, Illiciaceae, Schisandraceae) includes star anise
Magnoliales
Winterales
Piperales
Laurales
   Persea americana (avocado) 71A1, 715B1

  Liliopsida (Monocotyledons)

Acorales (sister group to other monocots)
Alismatales
  Triglochin maritima 79E1, 79E2
Asparagales
  Asparagus officianalis 71G1, 71J1
  Hemerocallis hybrid cultivar (daylily) 81J1
  Phalaenopsis sp. hybrid SM9108 (moth orchid) 78A2
Arecales
Commelinales
  Musa acuminata (banana) 71N1
Poales (includes Poaceae, grasses)
  Avena (oats) 96B1
  Hordeum vulgare (barley) fragment 71C-like, 71L1, 71M1, 72A39, 73A34,
   74A1, 74A3, 79A8, 79A12, 727A2
  Lolium rigidum(ryegrass) 71R4
  Oryza sativa (rice) 455 sequences (see rice button on main page)
  Saccharum officinarum(sugar cane) fragment 90A-like, 724B4
  Sorghum bicolor 51, 71E1, 79A1, 98A1, 99A1
  Triticum aestivum (wheat) 51, 71C6, 71C7, 71C8, 71C9, 71C10, 71C11, 
   71E2, 71F1, 71M3, 72A6, 73A17, 76H1, 76H2, 76H3, 79A5, 79A6, 81L1, 
   86A5, 86A6, 98A10, 98A11, 98A12, 709C1, 709C2, 709C3, 723A1, 727A3
  Zea mays (maize) 51, 71C1, 71C2, 71C3, 71C4, 71C5, 72A5, 72A16, 72A26
   73A6, 73A7, 73A8, 78A1, 81A1, 81A2, 81A3, 81A4, 88A1, 90 ESTs, 92A1, 92A4
   97 EST, 98A7 ESTs, 707 EST
Zingiberales
Discreales
Liliales
Pandanales

  Eudicotyledons

Ceratophyllales (sister group to other eudicots)

     Lower Eudicots

Nelumbo
Platanus
Sabia
Lambertia
Trochodendron
Tetracentron
Pachysandra
Ranunculales
  Berberis stolonifera 80A1
  Eschscholzia californica (California poppy) 80B1, 82B1, 719A2, 719A3
  Coptis japonica (Japanese goldthread) 80B2, 719A1
  Papaver somniferum (opium poppy) 80B3

  Core Eudicots (six well supported subclades)

(1) Berberidopsidaceae/Aextoxicaceae
(2) Myrothamnaceae/Gunneraceae
(3) Saxifragales (Vitaceae, eurosids)
       Liquidambar styraciflua (sweetgum) 84A3
       Vitis vinifera (grape) 76F2

eurosids I

Celestrales
Cucurbitales
  Cucumis sativus (cucumber) 74B6P, 74C1
  Cucumis melo (cantaloupe mellon) 74C2
  Cucurbita maxima (pumpkin) 88A2, 701A1, 701A2
Fabales
  Cicer arietinum (chickpea) 73A19, 76D1, 76F1, 81D9, 81E2, 81E3, 81E4,
   81E5, 91A5, 93C3, 97A1
  Glycine max (soybean) 71A9, 71A10, 71D8, 71D9, 71D10, 73A11, 77A3,
   78A3,82A2, 82A3, 82A4, 82C1, 83D1, 84A ESTs, 93A1, 93A2, 93A3, 
   93C1, 93C4, 93C5, 93E1, 97B2, 97C, 98A2
  Glycyrrhiza echinata (licorice) 73A14, 81E1, 84A PCR fragment, 
   91A4, 93A PCR fragment, 93B1, 93C2
  Lens cunicularis (lentil) 93C12, 93C13
  Lotus japonicus 71D11, 79D3, 79D4, 81E6, 83E2, 83E3, 83E4, 83E5,
   83E6, 83E7, 93C17, 706A9P, 736A2
  Lupinus albus 93C16
  Lupinus luteus (yellow lupine) 74AP1, 74AP2
  Medicago sativa (alfalfa) 73A3, 74B4, 76B3, 76B4, 76E1, 82D1, 83D2
   83E1, 93C7, 93C8
  Medicago truncatula 81E7, 81E8, 81E9, 87 fragment
  Phaseolus aureus (mung bean) 73A2
  Phaseolus vulgaris (french bean, kidney bean) 73A15, 98A5
  Pisum sativum (pea) 73A9, 82A1, 88A6, 88A7, 92A6, 93C14, 93C18, 
   94 fragment, 97B1, 701A10
  Trifolium pratense 93C9
  Trifolium repens 93C10
  Vicia sativa 89A1, 94A1, 94A2, 94A3
  Vicia villosa 93C15
  Vinga radiata 90A2, 93C6
Fagales
Malpighiales
  Linum usitatissimum (flax) 74A
  Manihot esculenta (cassava) 79D1, 79D2
  Populus tremuloides (quaking aspen) 73A13
  Populus kitakamiensis (hybrid aspen) 73A16
Oxalidales
Rosales
  Prunus dulcis chloroplast  (almond) 71D17
  Pyrus communis (pear) 736A1
Zygophyllales

eurosids II

Brassicales
  Arabidopsis thaliana (thale cress) 272 sequences see Arabidopsis button
  Brassica campestris (field mustard) 86A3
  Brassica naupus (rape) 79B5
  Matthiola incana (common stock) 75B7, 706A8
  Sinapis alba (white mustard) 79B1
  Thlaspi arvense 71B1
Malvales
  Gossypium hirsutum (cotton) 73A25, 73A26, 97C fragment
  Gossypium arboreum 706B1, 706B2
Sapindales
  Citrus sinensis 73A29, 73A36
  Citrus paradisi 73A37
  Ruta graveolens (common rue) 73A32

 additional eurosids

Crossomatales
Gerianales
  Pelargonium x Hortorum (house geranium) 75B8
Myrtales
  Psidium guajava (guava) 74B5

(4) Santalales
(5) Caryophyllales/Dilleniaceae
      Mesembryanthemum crystallinum (ice plant) 73A22
      Beta vulgaris 93C11
(6) asterids

Cornales
Ericales

      euasterids I

Garryales
Gentianales
  Catharanthus roseus (Madagascar periwinkle) 71A7, 71D1, 71D2, 71D12, 
    72A1, 73A4, 75A8, 76A7, 76B6, 96C1, 
  Eustoma grandiflorum (lisianthus) 75A5
  Eustoma russellianum 75A7
  Gentiana triflora 75A4, 75B9
Lamiales
  Antirrhinum majus (snapdragon) 93B3
  Coleus blumei 98A14
  Mentha X piperita (peppermint) 71A8, 71D13, 71D15
  Mentha spicata (spearmint) 71D18
  Nepeta racemosa (catmint, source of catnip) 71A5, 71A6
  Omicum basilicum (basil) 98A13
  Perilla frutescens (beefsteak mint) 75B4, 93B6
  Sesamum indicum (sesame) 98A20
  Torenia hybrida (torenia) 93B4, 75A10, 75B10
Solanales
  Capsicum annuum (bell pepper) 71D19, 74B1, 701A4
  Capsicum chinense (habanero chile) 73A21
  Lithospermum erythrorhizon 73A30, 73A31, 98A6
  Lycianthes rantonnei (blue potato bush) 75A9
  Lycopersicon esculentum or Solanum lycopersicum (tomato) 71AH1, 72A30, 
    73A18, 73A24, 73A27, 73A28, 74A1, 74A2, 74B3, 74C3, 74C4, 74D1, 
    76A6, 81B2, 81C1, 81C2, 84A2, 85, 88B1, 90A5, 90C2, 707A7, 707A8, 
    710A11, 724B2, 734A7, 734A8
  Nicotiana attenuata 74A1
  Nicotiana plumbaginifolia 72A2
  Nicotiana tabacum (tobacco) 71D5, 71D6, 71D16, 71D20, 71D21, 82E1, 
    92A2, 92A3, 94A4, 92A5, 94A5, 94A6, 94A7, 94A8
  Petunia hybrida (petunia) 71D14, 75A1, 75A3, 75B2, 76A3, 76A4, 76A5,
    76B2, 76B5, 76J1, 92B1, 703A1
  Solanum chacoense (Chaco potato) 71D6, 71D7, 
  Solanum melongena cv. Sinsadoharanasu (eggplant) 71A2, 71A3, 71A4, 
    75A2, 76A1, 76A2, 77A1, 77A2
  Solanum tuberosum cv. Datura (potato) 71D4, 72A29, 74D2

    euasterids II

Apiales
  Ammi majus (Bishop's weed) 71AJ1, 73A41, 76B8, 82H1, 98A21
  Pastinaca sativa (wild parsnip) 76B7
  Petroselinum crispum (parsley) 73A10, 83C1
Aquifoliales
Asterales
  Callistephus chinensis 75B5, 75B6, 93B5
  Campanula medium 75A6
  Gerbera hybrid (Barberton Daisy) 93B2
  Helianthus tuberosus (Jerusalem artichoke) 73A1, 76B1, 81B1
  Helianthus annuus (sunflower) 87A1
  Parthenium argentatum (guayule, a desert shrub) 74A1
  Stevia rebaudiana 701A5
  Zinnia elegans 73A12
Dipsacales


References

1.  Soltis, D.E., Soltis, P.S. and Chase, M.W. (1999) Angiosperm phylogeny inferred 
from a combined data set of 18S rDNA, rbcL and ATPB sequences.  Abstract of The 
XVI International Botanical Congress meeting in St. Louis Aug. 1-7, 1999 abstract

2. Treezilla project: go to Treezilla description includes ASCII version of 500 rbcL tree.
go to Treezilla abstract
Ken Rice ken_rice@sbphrd.com
Michael Donoghue mdonoghue@oeb.harvard.edu 
Dick Olmstead olmstead@spot.colorado.edu

3. Taxonomy Browser at NCBI jump to browser