Silkworm Accession numbers in Genbank WGS section

 

250 accessions from WGS (Whole Genome Shotgun) database at Genbank

red numbers indicate complete genes

The BAAB numbers are found in the WGS section of Genbank

The Bmb numbers are cross-references to contigs in the Chinese Silkworm genome project

The Chinese sequences are still confidential.

 

D. Nelson July 7, 2004

 

BAAB01000816.1 Bmb038385 28% TO 4G15

BAAB01000958.1 Bmb025541 and Bmb025543 68% to 9A13

BAAB01001005.1 Bmb026086 and Bmb022412 CYP9A

BAAB01003905.1 --------- 81% to Bmb008696 exons 1,2

BAAB01006099.1 Bmb030453 Bmb043463 CYP301A

BAAB01006148.1 Bmb008696 new family 79% to Bmb035473

BAAB01006192.1 Bmb005072 67% to Bmb008696

BAAB01008096.1 Bmb016549 CYP4S

BAAB01008306.1 Bmb029934 Bmb010351 40% to 6AA1

BAAB01008375.1 --------- 94% identical to Bmb016550

BAAB01008628.1 Bmb008696 new family 79% to Bmb035473

BAAB01009268.1 Bmb008696 new family 79% to Bmb035473

BAAB01010488.1 --------- new family N-term

BAAB01011842.1 Bmb038385 36% TO 4G15

BAAB01012981.1 --------- 80% to Bmb037924

BAAB01013356.1 Bmb025541 and Bmb025543 68% to 9A13

BAAB01014940.1 Bmb023341 CYP49

BAAB01015588.1 --------- new family N-term

BAAB01015589.1 --------- new family N-term

BAAB01016062.1 Bmb031911 and Bmb031912 45% to 324A1

BAAB01016115.1 --------- CYP306A1

BAAB01016786.1 --------- 90% to Bmb018467 exon 3

BAAB01018170.1 --------- New family N-term

BAAB01018260.1 Bmb029010 44% to CYP325F 95% to Bmb018467 and Bmb022600

BAAB01019896.1 --------- new family C-term 34% to 325F2

BAAB01020228.1 Bmb008079 51% to 307A1 probable ortholog

BAAB01020563.1 Bmb035757 44% to 6AB1

BAAB01021114.1 --------- CK534983 CYP12 like

BAAB01021567.1 Bmb030331 72% to 6AB2

BAAB01021854.1 Bmb035473 91% to Bmb037924

BAAB01022101.1 Bmb007616 35% to 4C3

BAAB01022270.1 Bmb019913 CYP302A like

BAAB01022841.1 Bmb019627 35% to 303A1

BAAB01023249.1 Bmb022601 Bmb011719 35% to 4G1

BAAB01023742.1 --------- exon 8 1 aa diff to BAAB01083548.1

BAAB01023413.1 --------- exon 2, 66% to BAAB01003905.1

BAAB01024995.1 --------- exon 9

BAAB01025317.1 Bmb016549 CYP4S

BAAB01026721.1 Bmb018392 46% to Bmb005072

BAAB01029726.1 Bmb004533 new family? N-term 34% TO 9A1

BAAB01030444.1 Bmb030453 Bmb043463 CYP301 like

BAAB01031047.1 Bmb018469 43% to 4G15 96% to Bmb022601

BAAB01031702.1 Bmb002871 Bmb015732 45% to 303A1

BAAB01033068.1 Bmb007891 CYP6AE

BAAB01034164.1 --------- CK533198

BAAB01034175.1 Bmb029866 75% to 9A14

BAAB01034600.1 Bmb015497 59% to 9G1

BAAB01035425.1 Bmb018392 46% to Bmb005072

BAAB01035519.1 Bmb006234 39% to 12B2 mito

BAAB01036273.1 Bmb022600 CYP325 like

BAAB01038139.1 --------- exon 4 2 aa diffs to Bmb008696

BAAB01039204.1 Bmb022601 Bmb011719 35% to 4G1 exact match to Bmb022600

BAAB01039373.1 Bmb019905 CYP4M5

BAAB01040509.1 Bmb019913 CYP302A like

BAAB01040719.1 Bmb037924 91% to Bmb035473

BAAB01044466.1 Bmb030151 42% TO 313A4

BAAB01045792.1 Bmb037542 37% TO 313A4

BAAB01046229.1 Bmb033341 35% TO 4D22

BAAB01046550.1 Bmb022601 Bmb011719 35% to 4G1

BAAB01049676.1 --------- 306A1

BAAB01050176.1 Bmb008696 new family 79% to Bmb035473

BAAB01050777.1 Bmb008363 58% to 4G19

BAAB01050816.1 Bmb008696 new family 79% to Bmb035473

BAAB01053162.1 Bmb018467 new family

BAAB01054179.1 Bmb016549 CYP4S

BAAB01055413.1 Bmb040928 CYP4AU

BAAB01056249.1 Bmb023341 CYP49

BAAB01056719.1 Bmb008696 new family 79% to Bmb035473

BAAB01058563.1 --------- 94% identical to Bmb016550

BAAB01059276.1 Bmb021357 like CYP4S3

BAAB01059505.1 Bmb029010 44% to CYP325F 95% to Bmb018467 and Bmb022600

BAAB01061620.1 Bmb022601 Bmb011719 35% to 4G1

BAAB01063049.1 Bmb026086 and Bmb022412 CYP9A

BAAB01063629.1 --------- CYP9A like I-helix region

BAAB01063661.1 --------- CYP314 like

BAAB01064142.1 Bmb022413 and Bmb022414 CYP9A

BAAB01064450.1 Bmb013780 CYP6B like

BAAB01065359.1 Bmb032387 65% to 6AN1

BAAB01068119.1 Bmb031911 and Bmb031912 45% to 324A1

BAAB01068157.1 Bmb018467 new family

BAAB01068196.1 Bmb018467 new family

BAAB01069738.1 Bmb028016 CYP314 like

BAAB01072071.1 Bmb004533 new family? N-term 34% TO 9A1

BAAB01073561.1 Bmb020204 4 aa diffs to Bmb037924

BAAB01073803.1 Bmb008360 and Bmb008359 CYP4G

BAAB01074380.1 Bmb003947 CYP6

BAAB01075467.1 --------- CYP306A1

BAAB01076430.1 ETAM exon 4

BAAB01077546.1 Bmb031263 40% to 6AA2

BAAB01077706.1 Bmb005072 67% to Bmb008696

BAAB01077742.1 --------- 68% to BAAB01022101.1

BAAB01077822.1 --------- exon 1

BAAB01080812.1 Bmb035473 91% to Bmb037924

BAAB01081335.1 Bmb011306 43% to CYP18A1

BAAB01081406.1 Bmb008984 CYP9G1

BAAB01081659.1 Bmb016549 CYP4S

BAAB01081811.1 Bmb023642 64% TO 6AB1

BAAB01083548.1 --------- exon 8 1 aa diff to BAAB01023742.1

BAAB01083643.1 Bmb006234 39% to 12B2 mito

BAAB01083735.1 Bmb023341 CYP49

BAAB01085960.1 Bmb002436 and Bmb002437 84% to CYP4G20

BAAB01087326.1 --------- CYP9G1

BAAB01088903.1 Bmb031911 and Bmb031912 45% to 324A1

BAAB01089735.1 Bmb005072 67% to Bmb008696

BAAB01090513.1 Bmb029009 34% to 4C1 exons 3,4

BAAB01090784.1 --------- exons 7,8,9,10 45% to Bmb005072

BAAB01091102.1 Bmb020819

BAAB01091139.1 --------- CYP6AE

BAAB01091571.1 Bmb031457 49% to Bmb018392 I-helix

BAAB01091974.1 Bmb021627 93% to Bmb000092

BAAB01092011.1 --------- 3 aa diffs with Bmb008696 N-term

BAAB01092224.1 Bmb005072 67% to Bmb008696

BAAB01092271.1 --------- 25% to 4S4 possible ETAM exon

BAAB01092938.1 --------- ETAM exon

BAAB01092965.1 Bmb016550 Bmb016551 Bmb036197 50% to CYP4S4

BAAB01093085.1 Bmb039950 CYP4L

BAAB01093561.1 Bmb020819

BAAB01093671.1 Bmb030453 Bmb043463 CYP301A

BAAB01096550.1 --------- exon 9, part of exon 10 50% to Bmb005072

BAAB01096639.1 --------- ETAM exon 4

BAAB01096775.1 Bmb000092 51% to CYP6AE1

BAAB01096964.1 Bmb025541 and Bmb025543 68% to 9A13

BAAB01097088.1 Bmb029866 75% to 9A14

BAAB01097680.1 Bmb019905 CYP4M5

BAAB01097697.1 Bmb039950 CYP4L

BAAB01098630.1 Bmb018467 new family

BAAB01098782.1 Bmb031911 and Bmb031912 45% to 324A1

BAAB01099467.1 Bmb019905 4M5

BAAB01099804.1 Bmb001426 314A

BAAB01100580.1 Bmb011920 CYP6/CYP321

BAAB01102208.1 --------- 94% identical to Bmb016550

BAAB01102325.1 Bmb008079 51% to 307A1 probable ortholog

BAAB01102862.1 Bmb030453 Bmb043463 CYP301A

BAAB01103156.1 --------- 57% to 4M5

BAAB01103225.1 Bmb008696 new family 79% to Bmb035473

BAAB01104455.1 Bmb028841 mitochondrial P450 61% to CYP333A1 I-helix

BAAB01104811.1 Bmb035473 91% to Bmb037924

BAAB01105883.1 Bmb013780 CYP6B like

BAAB01106113.1 --------- 90% to BAAB01003905.1 2 N-terms facing apart

BAAB01106539.1 --------- exon 5

BAAB01106541.1 --------- exon 9 91% to Bmb035473

BAAB01107041.1 Bmb039950 CYP4L

BAAB01107379.1 --------- new family C-term 34% to 325F2

BAAB01108434.1 --------- exon 8, 4 aa diffs to Bmb035473

BAAB01110168.1 Bmb008363 58% to 4G19

BAAB01110300.1 --------- 2 aa diffs to BAAB01046229.1 exon 2 and part of 3

BAAB01113890.1 Bmb040074 42% TO 6D4

BAAB01114672.1 Bmb026086 and Bmb022412 CYP9A

BAAB01117890.1 --------- exon 8 1 aa diff to BAAB01083548.1

BAAB01118673.1 combined Bmb002436 and Bmb002437

BAAB01118814.1 Bmb029934 Bmb010351 AV399740 N-term 41% to 9E2 (2nd gene on contig)

BAAB01119140.1 Bmb014011 CYP332A

BAAB01119552.1 Bmb019913 CYP302A like

BAAB01119643.1 --------- cyp315a1

BAAB01120305.1 Bmb006234 39% to 12B2

BAAB01121123.1 Bmb016549 CYP4S

BAAB01121615.1 Bmb039950 CYP4L

BAAB01122030.1 --------- 49% to 314A1

BAAB01125095.1 --------- exon 10 54% to CK533198

BAAB01125517.1 Bmb008984 CYP9G1

BAAB01125622.1 Bmb009083 Bmb026475 AB044900 CYP305B1

BAAB01126021.1 --------- CK533198 CYP4

BAAB01128878.1 Bmb037924 91% to Bmb035473

BAAB01129923.1 Bmb024374 40% to 6B1

BAAB01132138.1 --------- 302 like KYG motif region

BAAB01132146.1 Bmb038385 28% TO 4G15

BAAB01132355.1 Bmb030453 Bmb043463 CYP301A

BAAB01132789.1 --------- C-term exon 6AE

BAAB01132907.1 --------- exons 3,4  51% to Bmb005072

BAAB01133495.1 Bmb020819 CYP301 like

BAAB01133870.1 --------- exon 5

BAAB01134380.1 --------- C-term exon 6AE

BAAB01134599.1 Bmb030453 Bmb043463 BP117781 301A like

BAAB01135526.1 Bmb016550 Bmb016551 Bmb036197 50% to CYP4S4

BAAB01135732.1 Bmb017706 44% to 4d

BAAB01135847.1 Bmb008360 and Bmb008359 CYP4G

BAAB01136322.1 --------- C-term exon 6AE

BAAB01136435.1 Bmb031911 and Bmb031912 45% to 324A1

BAAB01136488.1 --------- CYP306A1

BAAB01136746.1 --------- CYP333 like

BAAB01137171.1 Bmb011920 CYP6/CYP321

BAAB01137180.1 --------- ETAM exons 4,5

BAAB01138999.1 --------- exon 6

BAAB01142776.1 --------- 57% to 4M5

BAAB01146424.1 Bmb023483 45% to 9E2

BAAB01149226.1 Bmb008360 and Bmb008359 CYP4G

BAAB01149335.1 Bmb021627 93% to Bmb000092

BAAB01149680.1 Bmb035443 36% TO 4H18 C-HELIX 48% to Bmb029009

BAAB01150296.1 Bmb029866

BAAB01150476.1 --------- 306A1

BAAB01150577.1 Bmb020819

BAAB01150672.1 Bmb022600 325 like

BAAB01152933.1 Bmb016550 Bmb016551 Bmb036197 50% to CYP4S4

BAAB01153386.1 Bmb004534 35% to CYP6s

BAAB01155686.1 --------- BP117781 301A like

BAAB01157214.1 Bmb019627 CYP303 like

BAAB01157576.1 Bmb014011 CYP332A

BAAB01157630.1 Bmb029934 Bmb010351 40% to 6AA1

BAAB01158176.1 Bmb006234 CYP12 like

BAAB01158865.1 --------- 42% to CYP333A1

BAAB01160330.1 --------- 75% to CYP333

BAAB01160534.1 Bmb008696 new family 79% to Bmb035473

BAAB01162196.1 Bmb020206 36% to 313B1

BAAB01162324.1 Bmb023642 64% TO 6AB1

BAAB01163949.1 Bmb037924 91% to Bmb035473

BAAB01166031.1 Bmb018467 new family

BAAB01167086.1 Bmb023566 exon 8

BAAB01169820.1 Bmb016705 53% to 6AE1

BAAB01171305.1 Bmb037924 91% to Bmb035473

BAAB01172535.1 Bmb026776 CYP6AE

BAAB01173477.1 Bmb023483 45% to 9E2

BAAB01174895.1 Bmb026776 CYP6AE

BAAB01177041.1 Bmb016549 CYP4S

BAAB01178163.1 Bmb021627 93% to Bmb000092

BAAB01178932.1 --------- 61% to 4M5

BAAB01180906.1 Bmb002871 Bmb015732 45% to CYP303A1

BAAB01181176.1 Bmb030264 36% to CYP321A1

BAAB01181661.1 Bmb018467 new family

BAAB01181662.1 Bmb016549 CYP4S

BAAB01182505.1 Bmb022413 and Bmb022414 CYP9A

BAAB01186081.1 Bmb031457 C-helix 45% to Bmb018392

BAAB01189227.1 Bmb022600 CYP325 like

BAAB01190249.1 --------- exon 6 86% to Bmb008696

BAAB01190855.1 Bmb024372 60% TO CYP18A1

BAAB01194854.1 --------- 94% identical to Bmb016550

BAAB01195862.1 Bmb004534 35% to CYP6s

BAAB01196580.1 Bmb008696 new family 79% to Bmb035473

BAAB01196919.1 Bmb016705 53% to 6AE1

BAAB01198981.1 Bmb020819

BAAB01199026.1 --------- C-term exon 6AE

BAAB01199362.1 Bmb008360 and Bmb008359 CYP4G

BAAB01199634.1 Bmb008696 new family 79% to Bmb035473

BAAB01200346.1 Bmb029934 Bmb010351 AV399740 N-term 41% to 9E2 (2nd gene on contig)

BAAB01203780.1 --------- CK533198

BAAB01203952.1 --------- 52% to CK533198 exon 8

BAAB01205437.1 Bmb016705 CYP6AE

BAAB01206095.1 Bmb035473 91% to Bmb037924

BAAB01206787.1 Bmb030331 58% to 6AB3

BAAB01207183.1 Bmb007891 CYP6AE

BAAB01209004.1 Bmb022413 and Bmb022414 CYP9A

BAAB01210600.1 --------- 84% to Bmb000092 53% to 6AE1

BAAB01210990.1 Bmb003145 new fam? 44% TO 4M8

BAAB01211363.1 Bmb000092 CYP6AE

BAAB01211364.1 --------- 84% to Bmb000092 53% to 6AE1

-------------- Bmb021626 87% to BAAB01211364.1

BAAB01211873.1 Bmb029934 Bmb010351 40% to 6AA1

BAAB01212205.1 Bmb008696 new family 79% to Bmb035473

BAAB01212925.1 Bmb008696 new family 79% to Bmb035473

BAAB01213048.1 --------- exon 9 94% to Bmb005072

 

  Database: Whole-Genome-Shotgun Sequences

    Posted date:  Jun 22, 2004  6:18 PM

  Number of letters in database: -313,754,817

  Number of sequences in database:  725,432